Mergeomics | A Web server for Identifying Pathological Pathways, Networks, and Key Regulators via Multidimensional Data Integration

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The Mergeomics web tool is freely accessible to all users.
We recommend using Chrome or Firefox for the best viewing experience.

About

Mergeomics is being actively developed by the Yang Lab in the Department of Integrative Biology and Physiology at UCLA. The Yang Lab at UCLA uses integrative genomics and systems biology approaches to better understand the molecular mechanisms of complex disease.

Citation

If you use the Mergeomics or PharmOmics web server or R package in published research, please be sure to cite appropriately.

Ding, J., Blencowe, M., Nghiem, T., Ha, S., Chen, Y., Li, G., & Yang, X. (2021). Mergeomics 2.0: a web server for multi-omics data integration to elucidate disease networks and predict therapeutics. Nucleic Acids Research, 49(W1):W375-W387. doi: 10.1093/nar/gkab405.

Arneson, D., Bhattacharya, A., Shu, L., Mäkinen, V., & Yang, X. (2016). Mergeomics: A web server for identifying pathological pathways, networks, and key regulators via multidimensional data integration. BMC Genomics, 17(1). doi:10.1186/s12864-016-3057-8

Chen Y., Diamante G., Ding J., Nghiem T., Yang J., Ha S., Cohn P., Arneson D., Blencowe M., Garcia J., Zaghari N., Patel P., Yang X. (2022). PharmOmics: A species- and tissue-specific drug signature database and gene-network-based drug repositioning tool. iScience, 25(4):104052. doi: 10.1016/j.isci.2022.104052.

Acknowledgement

We would like to thank Jessica Ding, Thien Nghiem, Montgomery Blencowe, Daniel Ha, Gaoyan Li, and Yen-Wei Chen for their contributions to the improved Mergeomics Web Server.

Get in Touch

Please contact us if you have any comments, suggestions, or would like to request a resource to be added on the web server.

Updates

We will make monthly screens for updated public resources and make functionality updates as necessary, which will be reported here.

Updates for large sample data releases will be made yearly.

June 2020

Mergeomics Web Server 2.0 is released

Next major update for sample resources: December 2021

Yang Lab - UCLA

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